Neurorust
- 12 Devlogs
- 60 Total hours
GPU accelerated neural network from scratch in rust
GPU accelerated neural network from scratch in rust
I thought using the network in the web would be a piece of cake. I was wrong.
After fixing some minor issues I wrote some quick code to test training. It worked… technically. It was really slow and froze my whole pc. A quick glance into my system monitor revealed the secret. All CPU cores were almost maxed out while the GPU sat idle. So after spending a bunch of time to use the GPU everything was back to the CPU again.
WebGPU is still experimental. Especially on Linux which is why instead of throwing an error when it couldn’t access my graphics card it just used all my CPU cores as a fallback. To get the GPU back into the game I started my browser with some flags and compatibility layers which makes training still slower than on native hardware but faster than with the CPU.
Hopefully this was the last major challenge and implementing the frontend will be easier.
After some more pain with the loss function, buffer sizes and shape mismatches I got a neural network running on the gpu. The GPU is about 10x faster than the CPU version although some hyperparameters can affect this result.
Now I want to build a small wasm interface and build a small web page around that to allow anyone to run a local neural net in the browser.
I initially thought porting the forward and backward passes to the GPU would be as simple as replacing Matrix with GpuMatrix everywhere. It wasn’t.
Unlike CPU operations, GPU operations can’t allocate memory themselves. On the CPU, x + 2 simply creates a new value. On the GPU, every operation needs a pre-existing buffer to write its result into. So x += 2 works, but y = x + 2 requires a buffer for y to exist first. And x = x + 2 isn’t supported on the GPU at all.
The solution is to pre-allocate buffers and keep them around, resizing them only when the batch size changes. It works, but it also means every struct starts accumulating buffer fields and scaling that approach to an entire network only makes the problem worse.
Next: some kind of global buffer manager, before tackling the loss function.
After adding all necessary operations on the GpuMatrix I implemented the forward pass. It was surprisingly hard to get the caching for the backward pass right because reallocating buffers on the gpu should be avoided. As always I let AI write some test cases and everything passed.
Next I’ll implement the backward pass which will hopefully let the network learn with incredible speeds.
I thought beating the CPU at matrix multiplication would be easy. It turns out that hand-optimized assembly code is a tough opponent.
My naive GPU version isn’t bad, though: it’s roughly on par with NumPy, and about 13x faster than my CPU code but still worse than I initially expected. There’s plenty of room to improve. Right now the GPU sits idle about 80% of the time, just waiting on memory reads.
For now, I’ll keep building out the rest of the neural net on the GPU and come back to optimizing matmul later.
In my last devlog I stated that doubling numbers on the GPU is only faster if you want to double a HUUUGE amount of numbers. Of course I wanted to see at what point the GPU really is faster. I found out that the CPU is actually quite good at doubling numbers so the GPU wasn’t faster at all. I then measured just the time the GPU takes to double the numbers ignoring the time it needs to transfer the data. With that the GPU eventually overtakes the CPU.
Turns out you have to go back to square one to run a neural net on the GPU. For me that meant writing a program that multiplies every number in an array by 2, on the GPU.
Rust has a great library called wgpu for talking to the GPU. It’s cross-platform and can even run in WebAssembly if you do it right. The problem: most tutorials only cover rendering, and my neural net doesn’t care about triangles on a screen, it needs compute. I never found a tutorial on compute shaders from scratch, so I read the rendering material, stripped out what didn’t apply (windows, vertices, …), and added what did (workgroup size, how a compute pass works, …). Not trivial, but the official wgpu compute example got me on track. I mostly just copied it.
GPU programming isn’t straightforward. Here’s everything required just to multiply an array by 2:
After 190 lines and some unexpected debugging (on code copied straight from an example, no less), I could finally double numbers fast, but only with huge arrays. Below a certain size, shuttling data to the GPU and back is slower than just doing the math on the CPU.
I don’t fully understand every step yet. Hopefully I won’t need to, or I’ll pick it up along the way.
Matrix multiplication is next, and most of the boilerplate above should carry over. Big questions remain about the final network, but taking it one step at a time should get me there eventually… or to a complete surrender, who knows.
After getting XOR working, I tried my neural net on MNIST (handwritten digit recognition). Loading the data was easier than expected, though getting it into the right shape for my network took some fiddling. To make sure I loaded it correctly, I drew a few of the digits to check they looked right before training.
Once that was sorted, training worked well, and the results were better than I hoped: 97.8% accuracy, in about 5 minutes.
I also experimented with running the whole thing in a browser, but that turned out to be more involved than expected, so I’m parking it for now and focusing on other improvements first.
After implementing loss functions, activation functions, and the forward and backward pass for the layers, I tried training a simple network to predict the XOR function.
After running the network, I found that it didn’t learn at all. The loss just stayed at 0.25 without any changes. Not only that, the whole neural network didn’t update anything.
After some initial digging, I had a feeling this was one of those dumb, simple bugs you can’t find for hours. Unfortunately, my feeling was right: the error was multiplying the bias instead of adding it. This is really bad because the bias initially has a value of 0, which means all outputs turn out to be 0 (not good).
Of course, the fix was a one character change: * to +.
Now that the network can predict XOR, I’ll see if it can also handle MNIST. I’m still a bit scared about performance issues with matrix multiplication.
I recently read a few chapters of The Rust Programming Language and wanted to put my newly gained knowledge to use. Naturally, the first thing that came to mind was building a neural network in Rust. I’d already tried this in Python and failed, so I figured maybe, for some reason, it would go better this time around.
The first step was implementing matrices and their operations in Rust, the most important of course being matrix multiplication. Since this would likely become the biggest bottleneck for the whole model, I got curious about its performance and benchmarked multiplying two 1024x1024 matrices.
The naive implementation took about 20 seconds. One simple optimization brought that down to 14 seconds.
Then I built with compiler optimizations enabled, and the naive implementation suddenly ran in 63 nanoseconds. I was floored, briefly convinced I’d stumbled onto some incredible compiler magic, before realizing what actually happened: the compiler had simply skipped the calculation entirely, since the result was never used. Classic dead code elimination.
After forcing the compiler to keep the computation, the naive implementation came in at a more believable 2 seconds, and the optimized version dropped to 200ms.
For comparison, Numpy does the same multiplication in about 4ms. Whether 200ms is fast enough for training neural nets in reasonable time remains to be seen.