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Devlog 6: since Devlog 5, I’ve made a lot of progress into turning FoldCheck into a more advanced and detailed tool. I’ve started by extracting the pLDDT confidence scores for p53 and linking them, so they display in the details panel on the right, adding confidence classifications and explanations of what different confidence meanings. I also expanded the information to include amino acid properties, chemical composition and the function of the region. another major addition was the Atom Explorer, which provides information about individual atoms, including their chemical elements, bonds and roles, within a selected part. a challenge i faced was building a search system, where typing a specific residue/atom actually finds it for you in the Mol*, takes you to it and clearly highlights it for you. i devloped a 3-level autocomplete system that suggests amino acids, real residue positions and actual atom names (for example: ARG 158 CA) extracted from the loaded structure. Along the way, several bugs were encountered, like atom extraction and resetting selections. I also added a Reset View button and improved how the panel responds to selections. Foldcheck now allows users to explore p53 from the whole-protein level down to individual atoms while connecting the 3d structure to scientific explanations and confidence data. Next step, PAE!

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